Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSLPSMSLHWSEGDNGGGSLGGSRRSFSKGSIYRHHFLSLDHSSARDVAVGLSRDVTNDRRATGTSAGFEWLQPWRTPQDCREGGVALLYSMQEVLENVRRARKTSLSELYAARGAGSPAASTTSLCHPQHLCPPRAATSGSSDDAEGRCGSVGEKSSCSAAGSRTSSVDRRRQRDRGERNVSVGKGVRSASDDSVQGIELATEVGRVAFSPPLQTATAAAASVPPIVPVIPRFSEVKTEQELIHQRQQQQPQPHPRSEAAKRRRCALANSGDDDDDAARSPHHPDASCPSGGCDQTARPGDSRHRPGMSVEWSGSDSNGDEPEALAQRRHASGVSADDDDVDTSNVHHGKDEERDEEEDRLSETDFGEGGHLACVPGDTLHQRYTLLKALGVGRSSRVWLAVDLEQCSLARCQLIRELGEREVRRLFRTLERPMFVAIKVFRCDPAYADCATYELKLSALIHENVMRRRQQQQQQQQRWPPARASHSASLPSSPIAVPAACDDPGGDLQESSDGGENSTSRPCDEAAVRTRADPTSSTPRSGRISNSGSVSAEVASPASTSATAFSGRLTTVRDAFAVEGAFGTHQCLVMDVLGAGVDRAINEAHLNGFPSAVARSIMQSSLQGLVLLAACHLVHTDIKPENLFFTDLEDDVAEEMLTFQSAQLHASQRQTLCSSFAHRSTAASVMMEREEVAAHEQQQQQHHGDGGTAEHTGVGQRSPFSDPSLPDYTHVDEAAADLHTVHAANAADAGASGDRVASSVTTLSAVAGGHDTLHSSQDSIAQVSRRPNFARTPTRRRSAYDVRLSGLGLSLVVPPCLRLGVRVLANYAADGGGMTADELVRQDPLEQLHWLCAQQQARLLRLPGDDDDDGLGSVAE--PWREERWRLA--GACAPAESPPPPTLDIGMSEDFIDEAELRALGLQELPKSDADGGRCAAGMAPDEYEEADVTDFVGVPAVDKPAAHHRTTVTTADVGVVGGTLPPATWRTASAATRAGGGRRTPLAAAKRRL------FAQCFHEGLATPRDPATVLTRCEGVAAASPTDSSSNSSSGAAPPAGAAAAAAAAA------TVLRRLECEIVR-----HQNYRRGAVLQSREYRAPEVLLGDFVLPACDIWSMGCIAYELVSGRFLIDCIVDRERFATAL--------SWQQQQRHGRKGCRAPDDD---GGGAHDAKDHSRDDD------EDTQQRLNKWDGRPVYLEDTEQDLDVFHLKAIMRLLGPPPVSFLRQQPIGLFIDDFFDEHGNFRFWERGEAQEAGMRLADPYRQLELTHWAAASRVSGASVAVGSGADRQQSPPLPESVSGVAASLDTDPPGAPSAASVGQHVASAQARRDPQDTMNYPIRTPAWQDVQAILREKLGSAEEAADFEVFLRRCLQWDPARRATAAELLADKWLVKYSGVVADASESDVVAEKEGGGDSDGEERRL
5KCV Chain:A ((20-452))-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IVKEGWLHKRGEYITWRPRYFLLKNDGTFIGYKERPAPLNNFSVAQCQLMKTER--------PRPNTFIIRCLQWT-----TVIERTFHVETPEEREEWTTAIQRVTMNEFEYLK-LLGKGTFGKVILVKEKATGRYYAMKILKKVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCP--EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVWQHVYEKKLSPPFKPQVTSETDTRYF---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5KCV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1528 45639 29.87 144.88
target 2D structure prediction score : 0.44
Monomeric hydrophicity matching model chain A : 0.59

3D Compatibility (PKB) : 29.87
2D Compatibility (Sec. Struct. Predict.) : 0.44
1D Compatibility (Hydrophobicity) : 0.59
QMean score : 0.101

(partial model without unconserved sides chains):
PDB file : Tito_5KCV.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5KCV-query.scw
PDB file : Tito_Scwrl_5KCV.pdb: