Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSNVPHKSSLPEGIRPGTVLRIRGLVPPNASRFHVNLLCGEEQGSDAALHFNPRLDTSEVVFNSKEQGSWGREERG--PGVPFQRGQPFEVLIIASDDGFKAVVGDAQYHHFRHRLP-LARVRLVEVGGDVQLDSVRIF
3NV1 Chain:A ((6-138))-YPMPFITTILGGLYPSKSILLSGTVLPSAQRFHINLCSG----NHIAFHLNPRFDENAVVRNTQIDNSWGSEERSLPRKMPFVRGQSFSVWILCEAHCLKVAVDGQHLFEYYHRLRNLPTINRLEVGGDIQLTHVQT-


General information:
TITO was launched using:
RESULT:

Template: 3NV1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 642 -45835 -71.39 -352.57
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain A : 0.78

3D Compatibility (PKB) : -71.39
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.78
QMean score : 0.641

(partial model without unconserved sides chains):
PDB file : Tito_3NV1.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3NV1-query.scw
PDB file : Tito_Scwrl_3NV1.pdb: