Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMCAAQMPPLAHIFRGT-FVHSTWTCPMEVLRDHLLGVSDSGKIVFLEEASQQEKLAKEWCFKPCEIRELSHHEFFMPGLVDTHIHASQYSFAGSSI--DLPLLEWLTKYTF-----PAEHRFQNIDFAEEVYTRVVRRTLKNGTTTACYFATIHT-----DSSLLLADITDKFGQRAFVGKVCMDLNDTFPEYK-----ETTEESIKETERFVSEMLQ-KNYSRVKPIVTPRFSLSCSETLMGELGNIAKTRDLHIQSHISENRDEVEAVKNLYPSYKNYTSVYDKNNLLTNKTVMAHGCYLSAEELNVFHERGASIAHCPNSNLSLSSGFLNVLEVLKHEVKIGLGTDVAGGY-SYSMLDAIRRAVMVSNILLINKVNEKSLTLKEVFRLATLGGSQALGLDGEIGNFEVGKEFDAILINPKASDSPIDLFYGDFFGDISEAVIQKFLYLGDDRNIEEVYVGGKQVVPFSSSV
5HME Chain:A ((2-438))--------RMILIRGLTRVITFDD-QERELEDADILID-GPKIVAVGKNLSDR---------SVSRTIDGRGMIALPGLINSHQHLYEGAMRAIPQLERVTMASWLEGVLTRSAGWWRDGKFG-PDVIREVARAVLLESLLGGITTVADQHPFFPGATADSYIDATIEAATDLGIRFHAVRSSMTLGKSEGGFCDDLFVEPVDRVVQHCLGLIDQYHEPEPFGMVRIALGPCGVTHDKPELFEAFAQMAADYDVRLHTHFYEPLDAG-MSDHLY-G-MTPWRFLEKHGWASDRVWLAHAVVPPREEIPEFADAGVAIAHLIAPDLRLGWGLAPIREYLDAGITVGFGTTGSASNDGGNLLGDLRLAALAHRPADPN-EPEKWLSARELLRMATRGSAECLGRP-DLGVLEEGRAADIACWRLDGVD-RV----------GVHDPAIGLIMTGLSDRASLVVVNGQVLVENERP-


General information:
TITO was launched using:
RESULT:

Template: 5HME.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2507 -42812 -17.08 -102.67
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain A : 0.69

3D Compatibility (PKB) : -17.08
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.69
QMean score : 0.457

(partial model without unconserved sides chains):
PDB file : Tito_5HME.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5HME-query.scw
PDB file : Tito_Scwrl_5HME.pdb: