Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MVAGLTNGELI-APMTYEEMVTSDFFEAWFQKFLLPTLTTP-SVIIMDNARFHRMGKLELLCEEFGHKLLPLPP-YSPEYNPIEKTWAYIKKNLKKVLPSCNTFYEALFSCSCFN--------------------------------------------------------------------------------------------------------------------------
2HG4 Chain:A ((9-901))EEKLRRYLKRTVTELDSVTARLREVEHRAGEPIAIVGMACRFPGDVDSPESFWEFVSGGGDAIAEAPADRGWEPDPDARLGGMLAAAGDFDAGFFGISPREALAMDPQQRIMLEISWEALERAGHDPVSLRGSATGVFTGVGTVDYGPRPDEAPDEVLGYVGTGTASSVASGRVAYCLGLEGPAMTVDTACSSGLTALHLAMESLRRDECGLALAGGVTVMSSPGAFTEFRSQGGLAADGRCKPFSKAADGFGLAEGAGVLVLQRLSAARREGRPVLAVLRGSAVNQDGASNGLTAPSGPAQQRVIRRALENAGVRAGDVDYVEAHGTGTRLGDPIEVHALLSTYGAERDPDDPLWIGSVKSNIGHTQAAAGVAGVMKAVLALRHGEMPRTLHFDEPSPQIEWAVSVVSQARSWPAGERPRRAGVSSFGISGTNAHVIVEEAPEADGPVPLVLSGRDEQAMRAQAGRLADHLAREPRNSLRDTGFTLATRRSAWEHRAVVVGDRDEALAGLRAVADGRIADRTATGQARTRRGVAMVFPGQGAQWQGMARDLLRESQVFADSIRDCERALAPHVDWSLTDLLSGARPLDRVDVVQPALFAVMVSLAALWRSHGVEPAAVVGHSQGEIAAAHVAGALTLEDAAKLVAVRSRVLRRLGGQGGMASFGLGTEQAAERIGRFAGALSIASVNGPRSVVVAGESG--PLDELIAECEAEAHKARRIPVDYASHSPQVESLREELLTELAGISPV--SADVALYSTTTGQPIDTATMDTAYWYANLREQVRFQDATRQLAEAGFDAFVEVSPHPVLTVGIEATLDSALPADAGACVVGTLRRDRGGLADFHTALGEAYAQGVEVDWSPAFADARPVELPVYPFQRQRYWLPI


General information:
TITO was launched using:
RESULT:

Template: 2HG4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 165 1615 9.78 14.95
target 2D structure prediction score : 0.67
Monomeric hydrophicity matching model chain A : 0.53

3D Compatibility (PKB) : 9.78
2D Compatibility (Sec. Struct. Predict.) : 0.67
1D Compatibility (Hydrophobicity) : 0.53
QMean score : 0.323

(partial model without unconserved sides chains):
PDB file : Tito_2HG4.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2HG4-query.scw
PDB file : Tito_Scwrl_2HG4.pdb: