Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMKLYNKSELRYSRIFFDKRPPAFAFILIISTAIILSGALVGAAYIPKNYIVKANGNSVITGTEFLSAISSGKVVTLHKSEGDMVNAGDVIISLSSGQEGLQASSLNKQLVKLRAKEAIFQKFEQSLNEKYNRMSNSGEEQEYYGKVEYYLSQLNSENYNNGTQYSKIQDEYTKLNKITAERNQLDADLQTLQNELIQLQQQGDSPSLSDTTSADDKAKLETKILEITTKIEALKTNITSKNSEIDSQQSNIKDMNRTYNDPTSQAYNIYAQLVSELGTARSNNNKSITELEANLGVATGQDKAHSILAPNEGTLHYLVPLKQGMSIQQGQTIAEVSGKEKGYYVEAFVLASDISRVSKGAKVDVAITGVNSQKYGTLKGQVRQIDSGTISQETKEGNISLYKVMIELETLTLKHGSETVVLQKDMPVEVRIVYDKETYLDWILEMLSFKQ
5J0K Chain:A ((6-79))---------------------------------------------------------------------------------------------------------------------------------------------------------------------TRTEIIRELERSLREQEELAKRLKELLRELERLQREGSS--------DEDVRELLREIKELVEEIEKLAREQKYLVEELKRQ-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5J0K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 119 -2696 -22.66 -36.43
target 2D structure prediction score : 0.55
Monomeric hydrophicity matching model chain A : 0.54

3D Compatibility (PKB) : -22.66
2D Compatibility (Sec. Struct. Predict.) : 0.55
1D Compatibility (Hydrophobicity) : 0.54
QMean score : 0.765

(partial model without unconserved sides chains):
PDB file : Tito_5J0K.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5J0K-query.scw
PDB file : Tito_Scwrl_5J0K.pdb: