Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMVMSDNTKYIFLSPHLDDAIFSCGDYISKLTSEGEIVLVITIFSGYPLSQQLQPSAKQFHKLCNLGKYPIEERKKEDRLACERLQCD-FRHLSYYECLYRKDRNGNFLYRHIYSELKNEDTLKNDIIKELLMHLDDKCVVYCPLSLGDHVDHVFVNSIGRALEFM-RYKVIYYEDFPYVSDSSMVSYMGKTKELKMYQEELDEKHYIDRISSILCYKSQILIIWKS-----VE---KLLNNIKELYLRN-GAAYSIRFWIKK
2IXD Chain:A ((2-221))----SGLHILAFGAHADDVEIGMAGTIAKYTKQGYEVGICDLTEADLSSNG-----------------TIELRKEEAKVAARIMGVKTRLNLAMPDRGLYM-----------------KEEYIREIVK--VIRTYKPKLVFAPYYEDRHPDHANCAKLVEEAIFSAGIRKYMPELSPHRVESFYNYMINGF-HKPNFCIDIS-EYLSIKVEALEAYESQFSTGSDGVKTPLTEGYVETVIAREKMFGKEVGVLYAEGFMSKK


General information:
TITO was launched using:
RESULT:

Template: 2IXD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1160 -66734 -57.53 -319.30
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain A : 0.66

3D Compatibility (PKB) : -57.53
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.386

(partial model without unconserved sides chains):
PDB file : Tito_2IXD.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2IXD-query.scw
PDB file : Tito_Scwrl_2IXD.pdb: