Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKLIVSVMPRSLEEAQAL-DATRYLDADIIEWRADYLPKEAILQVAPAIFEKFAGRELVFTLRTRSEGGEIDLSPEEYIHLIKE-VAQLYQPDYIDFEYYSYKDVFEEMLDFPNLVLSYHNFQETPENMMEILSELTILNPKLVKVAVMAHTEQDVLDLMNYTRGFKTLNPEQEYVTISMGKVGKVSRITADVTGSSWSFASLDEVSAPGQISLASMKKIREILDEA
3L9C Chain:A ((1-224))MKIVVPVMPQNIEEANQLDLTRID-STDIIEWRADYLVKDDILTVAPAIFEKFSGHEVIFTLRTEKEGGNISLSNEDYLAIIRDIAA-LYQPDYIDFEYFSYRDVLEEMYDFSNLILSYHNFEETPENLMEVFSELTALAPRVVKIAVMPKNEQDVLDLMNYTRGFKTLNPNQEYVTMSMSKLGRISRLAADLIGSSWTFASL-------QISLADMRKIKEVLDA-


General information:
TITO was launched using:
RESULT:

Template: 3L9C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1097 -35439 -32.30 -164.83
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain A : 0.92

3D Compatibility (PKB) : -32.30
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.92
QMean score : 0.571

(partial model without unconserved sides chains):
PDB file : Tito_3L9C.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3L9C-query.scw
PDB file : Tito_Scwrl_3L9C.pdb: