Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTVTTYIGLGSNLGDSRQILSEAITKLKSLGEV------KVSKLYQSPPMGPQDQPNYLNAVAQLKTELLPLELLDQLQRFEQEAGRVR-LRHWGERTLDLDLLIYGNEKIQNERLTVPHVGILQRDFVVIPLLDLDADLHINDQPLKNLELIQQPTLTVLADESWA
3HSD Chain:B ((1-139))--TVAYIAIGSNLASP---LEQVNAALKALGDIPESHILTVSSFYRTPPLGPQDQPDALNAAVALETSLAPEELLNHTQRIELQQGRVRKAERWGPRTLDLDIMLFGNEVINTERLTVPHYDMKNRGFMLWPLFEIAPELVFPD-----------------------


General information:
TITO was launched using:
RESULT:

Template: 3HSD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 628 10944 17.43 82.91
target 2D structure prediction score : 0.56
Monomeric hydrophicity matching model chain B : 0.79

3D Compatibility (PKB) : 17.43
2D Compatibility (Sec. Struct. Predict.) : 0.56
1D Compatibility (Hydrophobicity) : 0.79
QMean score : 0.488

(partial model without unconserved sides chains):
PDB file : Tito_3HSD.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3HSD-query.scw
PDB file : Tito_Scwrl_3HSD.pdb: