Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMASFEFIEDELNDGNGQARFTVFGVGGGGGNAVQHMVQSDIQGVKFVCANTDKQALDCMNAPFKIQLGEQSTRGLGAGANPEVGQVAAEESREIIRQHLEGTDMVFVTAGMGGGTGTGAAPVVAEVAKEMGILTVGVVTTPFNFEGRRRQKSAERGIEALEAHVDSLIIIPNQRLLSVYGD--ISMKDAYKKADDVLLNAVRSIFDLVVNRGHINLDFADLKTAMSTRGYAMMGAGLGRGEDRARQAAEQAIRSPLLDNVNIINAKGVLINITGGDDITLRETEIITDVVNQIVDLDEGEIFYGTVFDPDARDELRVTVIATGLTRNAADAEPRTRNTVSHTSTQSVDEDDVPAINKRQNAENDVNNAPSSTPRSSPMSIQDYLKNQQRK
2Q1X Chain:A ((22-312))------------------------------NAVNRMIEQGLKGVEFIAINTDAQALLMSDADVKLDVGRDS-------ADPEVGRKAAEDAKDEIEELLRGADMVFVTAGEGGGTGTGGAPVVASIARKLGALTVGVVTRPFSFEGKRRSNQAENGIAALRESCDTLIVIPNDRLLQM-GDAAVSLMDAFRSADEVLLNGVQGITDLITTPGLINVDFADVKGIMSGAGTALMGIGSARGEGRSLKAAEIAINSPLLE-ASMEGAQGVLMSIAGGSDLGLFEINEAASLVQDAAHPD-ANIIFGTVIDDSLGDEVRVTVIAAGF------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2Q1X.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1612 -75719 -46.97 -268.51
target 2D structure prediction score : 0.82
Monomeric hydrophicity matching model chain A : 0.81

3D Compatibility (PKB) : -46.97
2D Compatibility (Sec. Struct. Predict.) : 0.82
1D Compatibility (Hydrophobicity) : 0.81
QMean score : 0.594

(partial model without unconserved sides chains):
PDB file : Tito_2Q1X.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2Q1X-query.scw
PDB file : Tito_Scwrl_2Q1X.pdb: