Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAIQEIRHPLIRHKLGLLRRADISTKNFRELAQEVTMLLTYEATKDLPVVDCEIEGWAGNVTTQRIA---GKKITIVPILRAGIGMLDGVLNLIPSAKVSVLGLERDEAT-------LEVRTYYKKLVPDVANRI--AMIIDPMLATGNSLVAAIDVLKASGCKDIRVMVLVAAPEGIAKVEAAHPDIQLYTASIDNGLNEHGYIVPGLGDAGDKIFGSVQKD
3G6W Chain:D ((2-216))-PLYVIDKPITLHILTQLRDKYTDQINFRKNLVRLGRILGYEISNTLDYEIVEVETPLG-VKTKGVDITDLNNIVIINILRAAVPLVEGLLKAFPKARQGVIGASRVEVDGKEVPKDMDVYIYYKK-IPDIRAKVDNVIIADPMIATASTMLKVLEEVVKANPKRIYIVSIISSEYGVNKILSKYPFIYLFTVAIDPELNNKGYILPGLGDAGDRAFG-----


General information:
TITO was launched using:
RESULT:

Template: 3G6W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 1033 -40188 -38.90 -197.97
target 2D structure prediction score : 0.57
Monomeric hydrophicity matching model chain D : 0.77

3D Compatibility (PKB) : -38.90
2D Compatibility (Sec. Struct. Predict.) : 0.57
1D Compatibility (Hydrophobicity) : 0.77
QMean score : 0.520

(partial model without unconserved sides chains):
PDB file : Tito_3G6W.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3G6W-query.scw
PDB file : Tito_Scwrl_3G6W.pdb: