Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMPNVALFKQDGSQNGEITLNEEIFGIEPNESVVYDAIVMQRASLRQGTHAVKNRSAVRGGGRKPWRQKGTGRARQGSIRSPQWRGGGVVFGPTPRSYSYKLPKKVRRLAMKSVLSEKVAENNLVAIEGLNFDAPKTKEFKQVLANLSIDS--KVLVVLEKGNDFAALSARNLPNVSVVTSDNVSVLDVVSNTKVLATQTALTQIEEVLA
5DM7 Chain:C ((2-198))-AQINVIGQNGGRTIELPLP------EVNSGVLHEVVTWQLASRRRGTASTRTRAQVSKTGRKMYGQKGTGNARHGDRSVPTFVGGGVAFGPKPRSYDYTLPRQVRQLGLAMAIASRQEGGKLVAVDGFDIADAKTKNFISWAKQNGLDGTEKVLLVT--DDENTRRAARNVSWVSVLPVAGVNVYDILRHDRLVIDAAALEIVEE---


General information:
TITO was launched using:
RESULT:

Template: 5DM7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 756 -15983 -21.14 -81.96
target 2D structure prediction score : 0.73
Monomeric hydrophicity matching model chain C : 0.79

3D Compatibility (PKB) : -21.14
2D Compatibility (Sec. Struct. Predict.) : 0.73
1D Compatibility (Hydrophobicity) : 0.79
QMean score : 0.508

(partial model without unconserved sides chains):
PDB file : Tito_5DM7.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5DM7-query.scw
PDB file : Tito_Scwrl_5DM7.pdb: