Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMVVAWHRPTKAVIHKKAITENVANEVARLPQGKELFAVVKANGYGHGAIETAEAAVAGGASGFCVSNLDEGVELREAGFTQ-PILILNMVPYDALTVAVAHDLSVTAGTREWLQAAAAVLEKSKLE-TPLSIHLKADTGMGRIGFCTPEEVKEAAAFIKESRV--LEWEGLFTHFSTADQADDTYWNLQKERFIEVLKKLPEL-PRYVHVSNSATALWHDETIGNMIRYGVAMYGLNPSGHALPEV-YPLQPALELVSELIQVKKLPAGEGIGYGETYITPEAEWIGTIPIGYADGWPRKMQGFSLLVEGNYCETIGRVCMDQLMIRLPQEFPVGTKVTLIGKNADKEITMQDIADQLGTIHYEVACGLGQRIPREYQE
1BD0 Chain:A ((12-244))-------VDLDAIYDNVENLRRLLPD-----DTHIMAVVKANAYGHGDVQVARTALEAGASRLAVAFLDEALALREKGIE-APILVLGASRPADAALAAQQRIALTVFRSDWLEEASALY---SGPF-PIHFHLKMDTGMGRLGVKDEEETKRIVALIE--RHPHFVLEGLYTHFATADEVNTDYFSYQYTRFLHMLEWLPS-RPPLVHCANSAASLRFPDRTFNMVRFGIAMYGLAPSPGIKPLLPYPLKEA------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1BD0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1229 -49349 -40.15 -217.39
target 2D structure prediction score : 0.67
Monomeric hydrophicity matching model chain A : 0.68

3D Compatibility (PKB) : -40.15
2D Compatibility (Sec. Struct. Predict.) : 0.67
1D Compatibility (Hydrophobicity) : 0.68
QMean score : 0.485

(partial model without unconserved sides chains):
PDB file : Tito_1BD0.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1BD0-query.scw
PDB file : Tito_Scwrl_1BD0.pdb: