Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTIDWQKEVEARKEDLLEDLKNLLRVNSERDDSKVTPDAPFGPGPRDALKHMLAYGERDGFKVKNVD--NYAGHI-DL-GE--GDETLGIFGHMDVVPAG--DGWDTDPYEPVIKDGKIFARGSSDDKGPSMAAYYAMKIIKELDLKLSKKVRFVVGSDEESGWGDMAYYFEH-E---EEPDFGFSPDAEFP------IINGEKGNVSLALRFKGDNAGDYVLKSFVSGLRENMVPGTATAALQVPSADAAIAMEEAFYQFIEANPVSGTIEADNTYVKIELVG--KGAHGASPQSGINAGSFLALFLDNYEFLGSAK-----------------QFIHVAAAYVHE---DFYG------EKLGVAYEDEKMGKLTMNAGLFAFEE------NGTEEANFINMNFRFPKGVTVDGLQSDIEQTVGQEG---ATVTRGARVMEPHYVPMDDPLVATLLQVYEDHTGEK--GYEQIIGGGTYGRLLK----RGVAYGAMFPGYTDTMHQANEFMSLDDLFRATAIYADAIYRLAK
2POK Chain:A ((40-481))---------DHVAQHYFEVLRTLISKKSVFAQQ---------VGLKEVANYLGEIFKRVGAEVEIDESYTAPFVMAHFKSSRPDAKTLIFYNHYDTVPADGDQVWTEDPFTLSVRNGFMYGRGVDDDKGHITARLSALRKYMQHHDDLPVNISFIMEGAEESASTDLDKYLEKHADKLRGADLLVWEQGTKNALEQLEISGG---------------------------------------------------------------------NKGIVTFDAKVKSADVDIHSSYGGVVESAPWYLLQALQSLRAADGRILVEGLYEEVQEPNEREMALLETYGQRNPEEVSRIYGLELPLLQEERMAFLKRFFFDPALNIEGIQSGYQGQGVKTILPAEASAKLEVRLVPGLEPHDVLEKIRKQLDKNGFDKVELY-YTLGEMSYRSDMSAPAILNVIELAKKFYPQGVSVLPTTAGTGPMHTVFDALEVPMVAFGLGNANS--RDHGGDENVRIADYYTHIELVEELIRSYE-


General information:
TITO was launched using:
RESULT:

Template: 2POK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1696 44501 26.24 116.80
target 2D structure prediction score : 0.65
Monomeric hydrophicity matching model chain A : 0.65

3D Compatibility (PKB) : 26.24
2D Compatibility (Sec. Struct. Predict.) : 0.65
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.441

(partial model without unconserved sides chains):
PDB file : Tito_2POK.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2POK-query.scw
PDB file : Tito_Scwrl_2POK.pdb: