Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MNKNKRKQKHMSLLKEGIKMKDTGSSKQI-TTMTFIGMTCALVASVRNIPDVAATSWTMIFYMLV--AVLLYAFPISLISGEFAGMFPQKG------GPELWVSNALGKKWGFVVSWLLWVQMFPGMVMVAS----ALAPLFGNIIDNVPLGLNSKFTLVVILVVYWIITFLNLKFDMAKIGGKVGVWLGLYVPLTMMLLLGFAAWIKVGIVPTGTLGSFSWDKLIPDTTTASSFVYFAPIMFIFTG-IEMSSVYITRLENPVKTYIRGVFAALIFIFFVNI----LNALVVANVVPKGQMELNNIAQSISIYCQILGLPHLIVNLFSLLVFIGVAVQLSAWAS-GPAKTVTESARKGAYPPKFNFWKTNQFDVSKSVILTQSVIISIFALFYLLIPGVNQAFLMLVNSTTVIYCIVYVIMGIAVLRLRYTHAKLNRPFRIGKKEKKSNLGVWTVVIVLFAAIGFSVGLTMKAGTWINLIAVTAISVILFVVPLCIEKIKKPSWEQEVAMLLEKEKGELDGKTGNETDSN 5MPD Chain:S ((18-492)) LHHSEKKYAEEDQVQELLKVLNEISKTTLTLDPRYIWRSLKDLSSLRNQELLNAETLCFTVNVLYPDSSSFKKNLLKFITSNHKSSVPGSAELRNSYPASFYSVNTEKKTIEVTAEINCFMHLLVQLFLWDSKELEQLVEFNRKVVIPNLLCYYNLRSLNLINAKLWFYIYLSHETLARSSEEINSDNQNIILRSTMMKFLKIASLKH-------------------DNETKAMLINLILRDFLNNGEVDSASDFISKLEYP-HTDVSSSLEARYFFYLSKINAIQLDYSTANEYIIAAIRKAPHNSKSLGFLQQSNKLHCCIQLLMGDIPELSFFHQSNMQKSLLPYYHLTKAVKLG------DLKKFTSTITKYKQLLLKDDTYQLCVRLRSNVIKTGIRIISLTYKKISLRDICLKLNLDSEQTVEYMVSRAIRDGVIEAKINHEDGFIETT----------------------ELLNIYDSEDPQQVFDERIKFANQLHDEYLVSMRYPEDKKTQQNEK-------

General information: TITO was launched using: RESULT: Template: 5MPD.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain S - contact count / total energy / energy per contact / energy per residue : 1697 -105986 -62.45 -232.42 target 2D structure prediction score : 0.59 Monomeric hydrophicity matching model chain S : 0.62 3D Compatibility (PKB) : -62.45 2D Compatibility (Sec. Struct. Predict.) : 0.59 1D Compatibility (Hydrophobicity) : 0.62 QMean score : 0.139

(partial model without unconserved sides chains): PDB file : Tito_5MPD.pdb: (Unconserved sides chains are recalculated) : Sequence: align-5MPD-query.scw PDB file : Tito_Scwrl_5MPD.pdb: