Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence-----------------------------------------------------------MNDFTTE--------------IVQTLVTKGDLNELFRSHLEKAINTLLRTELTAFLDYEKYDRTGFNS---GNSRNGSYFRSIKTEYGELTLEIPRDRNGEFKQQTLPAYKRTNDTLE-----TTIIHLFE-------KGVTMSEIADLIEKMYG---------------HHYTPQTMSNMTKVLTEEVNAFKS-RALNDKYVAIFMDATYIP-------LKRQTVSKEAIYIAIGIREDGTKEVLSYAIAPTESTYVWNELLQDINSRGVQEVLLFIT---------DGLKGMKDTIHQIYPKAKYQHCCIHVSRNIAHKVRVKDRKEICDDFKAVYQANSKEEANTFLSGMIEKWKKNYPKVTQ-------------------------SLIENQDLLT-------------------------FYDFP---PSIRRTIYSTNLIESFNKQIKRYSRRKEQFQN----EESLERFLVSIFDTYNQKFLNRSHKRFSTGNRYISFNVY-------------------
5FQE Chain:A ((28-607))TTLGASIGSTDFHYLQKDYDEIKKLNLNTWNEVAWIGDELNSKIVMWTNSSPVNNVTLSSSDFINENGDLISSNNIKISWLKETLANIGRSNP---SAPLEPFPDIIHNSGSLNIEKNKIASAWINIKIPRNAKPGIYNGSIEVTADELEKSYTFDYSFEVLNLVQPLPSETNTQIEFWQHPYTIARYYKICKEDLFTEKHFKYLRGNLKEYRNMGGRGVIATIVHEAWNHQSYDSDPSMIKWRKNSYGTFEFDYSHFDKWIQLNIDLGILDPEKGFGQIKCYSIVPWNNRIQYFNEATNKEEAINPTPGSDLWINIWTQFLTSFMSHLEEKGWFNITYISMDERSMDDLKACVDLIENI-TNNSYEHFKISSAMDYESGNDYSFLDRIDDISIGLSHINHN---SDDMKNMATHRQELGLLTTIYTCTGDYPSSFTISDPSEGAFTIWYSLYQNTNGFLRWSWDGWVENPLENVSYKYWEPGDPFLIYPAEKDSIGKTFYSTPRLEKLKEGIRDINKAKYLMEKAPNLKNSIENLIYSLKRPNKGENAYGSAVAASKEDRDLTISEANRIKNGINNFAREFISLTM


General information:
TITO was launched using:
RESULT:

Template: 5FQE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1758 117494 66.83 305.97
target 2D structure prediction score : 0.44
Monomeric hydrophicity matching model chain A : 0.62

3D Compatibility (PKB) : 66.83
2D Compatibility (Sec. Struct. Predict.) : 0.44
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.175

(partial model without unconserved sides chains):
PDB file : Tito_5FQE.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5FQE-query.scw
PDB file : Tito_Scwrl_5FQE.pdb: