Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMDKYEILAQIGDGTFGSVAKAVSKKTGQLVAIKKMKQKFYTWEECV---KLPEVDVVRRIHGHPNVVKLREVIRENNELFFVFEYMDGDLLGVIKKAKQQGGPPASTPSAAPLIPYPLVKNYMRQMLQALVYIHKRGYFHRDMKPENLLIRKEASGDEVLKLADFGLVKEICARPPFTDYVSTRWYRAPELLLQDRFYGAAVDVWAAGCIMAELITMRPLFPGTNEVDQLFKIMSVLGSPTEEVWAGGLRLAKKIRYTFPKVAGSGLAQALPSHIPL--PALDLLRQMLVYDPKVRLTAEQCLQHPFFNVGIDECNAPSAAALDQLALMAKRMLPGSKTAPPALKSPTAGQVAALKAARASTDASLSDTSSRKFYLLGTLKDPAPSLPKLPVALSTSPPSLDAPPNASSPLRGRGALSPAGMPVLANGHQCPSLTTTVAKGKRRSQETADTSLAKKLAGLKNVPTGKGKLPVSYALPAASAVHSPRAAPNLKVSASVARPYPLAPTANNRDAVASPRHHNPYKEAETTSPTAASAAAKVEIDLDELMEEFASEMTAMGVLAQRHDSGASAESKSESYVSQPALPPDPVATLLNNSRYRRKSTTSADPLLKGNNSPRATHQLDTRKVDDVAAKSDLPRIDHSAPKGMSPSLKALLAKHKTSGLAFP
5K4J Chain:A ((2-288))MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR---------VPSTAIREISLLKELN-HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG------------IPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGA----IKLADFGLARA---------EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMP-DYKPSFPKWARQDFSKVVP---PLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5K4J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1274 -49489 -38.85 -186.75
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain A : 0.67

3D Compatibility (PKB) : -38.85
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.569

(partial model without unconserved sides chains):
PDB file : Tito_5K4J.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5K4J-query.scw
PDB file : Tito_Scwrl_5K4J.pdb: