Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSAFSSVLGAPGATGDVKYVKKKLIGTGSYGEAWLVERASDKAIFVAKTMDLGKMSSRDRTYAYSEIKCLASCHHPNIIKYIEDKED--NEHLLIVMEFADSGDLDRQIKARATDFKHFQEHEALFLFLQLCLALDHIH---GHKMLHRDIKGANVLLTSTGLIKIGDFGFSHQYDDTVSGVVANTFCGTPYYLAPELWNNQRYSKKADVWSLGVLLYEIMALKRPFTSTNMKGLMAKVLSGDYEPLPEVYSADFRDVVRKILVCDAAQRPSVRDIFRFPYVREGLKVFMHTMKKNSRIDNEVKDALMEHVTEILSSESVEVPKSTPVGQINKDVFFSGYLNKLKGGDNHSWKRRYLQVQKGHFIMSDKESDTEGKALSLEHIQSVCPVPVSTAKREHVFALHTTSGKSMWFEAASLENMEEWIHAIQCGLGVA
2XNO Chain:A ((14-273))------------------------IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRS------RDLKPANVFLDGKQNVKLGDF-----------------FVGTPYYMSPEQMNR---NEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEILENPLILE------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2XNO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 976 -22434 -22.99 -97.96
target 2D structure prediction score : 0.72
Monomeric hydrophicity matching model chain A : 0.68

3D Compatibility (PKB) : -22.99
2D Compatibility (Sec. Struct. Predict.) : 0.72
1D Compatibility (Hydrophobicity) : 0.68
QMean score : 0.536

(partial model without unconserved sides chains):
PDB file : Tito_2XNO.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2XNO-query.scw
PDB file : Tito_Scwrl_2XNO.pdb: