Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceTPMLDSLIEHRSPIFCLVQMCEMLDGGKKYCTRWYKVYPGGSHTFQEGGRDTITVTFDNKCKKSLSGSTKKRSIGFPTQLVYRSDDPILAGISKIFEPGRAPNYH
3MK2 Chain:A ((199-272))----------------------ILGGGRKYMFRMGTPDPEYPDDYSQGG---TRLDGKNLVQEWLAKRQGARYVWNRTELMQASLDPSVTHLMGLFEPG------


General information:
TITO was launched using:
RESULT:

Template: 3MK2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 280 -1634 -5.84 -22.08
target 2D structure prediction score : 0.43
Monomeric hydrophicity matching model chain A : 0.67

3D Compatibility (PKB) : -5.84
2D Compatibility (Sec. Struct. Predict.) : 0.43
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.068

(partial model without unconserved sides chains):
PDB file : Tito_3MK2.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3MK2-query.scw
PDB file : Tito_Scwrl_3MK2.pdb: