Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRMLPILLLFLALLPFFSKFVTGGSSFSWEVFLIFIIDWVLLIVFAIQISYIFWRLSQKWKELSNK
2LJ2 Chain:A ((44-68))-------------------------------------DYVLLPALAIFIGLTIYAIQRKRQA----


General information:
TITO was launched using:
RESULT:

Template: 2LJ2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 4 -1414 -353.38 -56.54
target 2D structure prediction score : 0.68
Monomeric hydrophicity matching model chain A : 0.46

3D Compatibility (PKB) : -353.38
2D Compatibility (Sec. Struct. Predict.) : 0.68
1D Compatibility (Hydrophobicity) : 0.46
QMean score : 0.134

(partial model without unconserved sides chains):
PDB file : Tito_2LJ2.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2LJ2-query.scw
PDB file : Tito_Scwrl_2LJ2.pdb: