Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMKTSDFVKYLQRMIAITDTGLTFTKDPFDRERYEDLRSLLSEMLNQVSDLDADEVAELLKPTSAYATPLMDVRAWIVEDEKICLVRGQGENDWALPGGFGEVGYSPTENILKEIEEETGFKAKVERLLAVFDTNRFQLQSK-----QYAKFVFECKLLDGQFQENQEIADLQFFAIDQLPNLSEKRITKEQIELLWQVYQGHRGQYLD
3SMD Chain:A ((23-136))----------------------------------------------------------------------SVAAVIKNEQGELLFQYP---YWSLPAGAIEPGETPEEAVIREVWEETGLKVQVKKQKGVFGGKEFRYTYANGDKVEYIVVVFECEITSGKLK------KLQYFSFSEKPPLA-------------------------


General information:
TITO was launched using:
RESULT:

Template: 3SMD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 397 -26857 -67.65 -271.28
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain A : 0.67

3D Compatibility (PKB) : -67.65
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.458

(partial model without unconserved sides chains):
PDB file : Tito_3SMD.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3SMD-query.scw
PDB file : Tito_Scwrl_3SMD.pdb: