Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNKKTRQTLIGLLVLLLLSTGSYYIKQMPSAPNSPKTNLSQKKQASEAPSQALAESVLTDAVKSQIKGSLEWNGSGAFIVNGNKTNLDAKVSSKPYADNKTKTVGKETVPTVANALL--------SKATR---QYKNRKETGNGSTSWTPPGWHQVKNLKGSYTHA---VDRGHLLGYALIGGLDGFDASTSNPKNIAVQTAW--------ANQAQAEYSTGQNYYESKVRK--ALDQNKRVRYRVTLYYASNEDLVPSASQIEAK----SSDGEL---EFN-------------VLVPNVQKGLQLDYRTGEVTVTQ
2XH3 Chain:A ((48-249))------------------------------------------------------------------------------------------------------TVSSKLLPFTANYQLQLGELDNLNRATFSHIQLQDRHET------------------------SSWVMNRGHLVGYQFCGLND-------EPRNLVAMTAWLATGAYSGANDSNPE---GMLYYENRLDSWLALHPDFWLDYKVTPIYSGNE-VVP--RQIELQYVGIDSSGELLTIRLNSNKESIDENGVTTVILENSAPNINLDYLNGTAT---


General information:
TITO was launched using:
RESULT:

Template: 2XH3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 566 43624 77.07 330.48
target 2D structure prediction score : 0.52
Monomeric hydrophicity matching model chain A : 0.64

3D Compatibility (PKB) : 77.07
2D Compatibility (Sec. Struct. Predict.) : 0.52
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.172

(partial model without unconserved sides chains):
PDB file : Tito_2XH3.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2XH3-query.scw
PDB file : Tito_Scwrl_2XH3.pdb: