Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGQLTDASVVLRFGYQAIRRAGLPTEEILTKAGVALNQVDTNARTPLSAQYAFWTAAQEVSKDPDIGLHLGEHLPLYRGQVIEHLFNSSETFGEGLKRALAYQRLISDAFDAKLVVEDGRCYLTNGEQVGADNLVNRHFSECAISGVLRFFKFITEGQFHPIFIDFNFSEGASEDEYFRVYGCPVSLGQKETRLYFDPAILDFQLWQAEPELLQLHEQLAIEKLQELARYDLVGEVRRAIGSTLESGETTLETVAAQLNITPRRLRTQLSEANTSFQQILSDYRCRLAKKLLANTNESVERIVYLTGFSEPSTFYRAFKRWTNETPVEYRKRKQHR
3GBG Chain:A ((170-266))---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AMEKISCLVKSDITRNWRWA-------------DICGELRTNRMILKKELESRGVKFRELINSIRISYSISLMKTGEFKIKQIAYQSGFASVSYFSTVFKSTMNVAPSEY-------


General information:
TITO was launched using:
RESULT:

Template: 3GBG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 326 -39800 -122.09 -410.31
target 2D structure prediction score : 0.70
Monomeric hydrophicity matching model chain A : 0.58

3D Compatibility (PKB) : -122.09
2D Compatibility (Sec. Struct. Predict.) : 0.70
1D Compatibility (Hydrophobicity) : 0.58
QMean score : 0.698

(partial model without unconserved sides chains):
PDB file : Tito_3GBG.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3GBG-query.scw
PDB file : Tito_Scwrl_3GBG.pdb: