Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMPNTIFLQRVADLYDTFKQHDSQQSDRLQRYRNIEVESAQLISQLIRMQQAKSILEIGTSTGYSTLWLAEAAQATGGQVITVEIDAKRSAEAKRHVAELELSEIVQFWVGDAADYLKA-----AQEKFDFILLDAERDAYENYWPDLKRLMKPKGGVLVVDNVI-------------SHAAEVNRFIALIKKDPDYMSSILPVGAGLCLVVTK
5LOG Chain:A ((39-216))-----------------------------RTMQIPPEQGQLLSLLVRLIGARKTLEVGVFTGYSTLCTALALPAD-GRVIACDLSEEWVSIARRYWQRAGVADRIEVRLGDAHHSLEALVGSEHRGTFDLAFIDADKESYDFYYEHALRLVRP-GGLIILDNTLWSGKVADPSVVGDPETDSLRRINAKLLTDERVDLSMLPIADGLTL----


General information:
TITO was launched using:
RESULT:

Template: 5LOG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 771 -46723 -60.60 -292.02
target 2D structure prediction score : 0.57
Monomeric hydrophicity matching model chain A : 0.73

3D Compatibility (PKB) : -60.60
2D Compatibility (Sec. Struct. Predict.) : 0.57
1D Compatibility (Hydrophobicity) : 0.73
QMean score : 0.607

(partial model without unconserved sides chains):
PDB file : Tito_5LOG.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5LOG-query.scw
PDB file : Tito_Scwrl_5LOG.pdb: