Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNSSQEPNQSLFNQASTSIQACIECMFACKHCASACLQEEHVHMMRKCIKHCLTCVETCQLCTSLELRHSELAEQA----MQLCANACQLCAAECSKH--EHEHCQVCAKACLACAQACQAYRA
5NQN Chain:A ((25-127))------------------VEMCFDCAQTCAACADACLGEDKVADLRHCIRLNLDCAEICVAAGSIASRAA-TEESILRTMLQTCAEMCRMCEEECRRHAGNHEHCRICADVCKECETACRS---


General information:
TITO was launched using:
RESULT:

Template: 5NQN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 391 -56567 -144.67 -589.24
target 2D structure prediction score : 0.76
Monomeric hydrophicity matching model chain A : 0.75

3D Compatibility (PKB) : -144.67
2D Compatibility (Sec. Struct. Predict.) : 0.76
1D Compatibility (Hydrophobicity) : 0.75
QMean score : 0.593

(partial model without unconserved sides chains):
PDB file : Tito_5NQN.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5NQN-query.scw
PDB file : Tito_Scwrl_5NQN.pdb: