Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKVVKAKNLIAFRIWLE----KLGYSVKNLADGKGFTFSLKKEYGLVTCDLAGNALAMQLGEEFEDHLKA
4KPT Chain:B ((135-166))--KAVGAKNGTAAQTWLQENQKKYGYTIKTYSDG-------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4KPT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 57 1232 21.61 44.00
target 2D structure prediction score : 0.43
Monomeric hydrophicity matching model chain B : 0.68

3D Compatibility (PKB) : 21.61
2D Compatibility (Sec. Struct. Predict.) : 0.43
1D Compatibility (Hydrophobicity) : 0.68
QMean score : 0.529

(partial model without unconserved sides chains):
PDB file : Tito_4KPT.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4KPT-query.scw
PDB file : Tito_Scwrl_4KPT.pdb: