Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTQSVYHIPVKTISGETVDLDQYKGKVLLIVNTASKCGLTP-QYEGLEKLYQAKKDQGLEILGFPANNFKEQEPGSDEEIQQFCSLNYDVHFPLFSKISVAGEDKHPLYQALTTAQPERIGEGPFRERLEGLGIPTNPAPEVLWNFEKFLVNKNGEVIARFAPNLTADDEQIVKAVEAELAK
5H5Q Chain:A ((10-154))-ARSMHEFSAKDIDGHMVNLDKYRGFVSIVTNVASQ-GKTEVNYTQLVDLHARYAERGLRILAFPSNQFGKQEPGSNEEIKEFAA-GYNVKFDMFSKIEVNGDDAHPLWKWMKI-QP------------KGKGILGNA---IKWNFTKFLIDKNGVVVKRYGP-------------------


General information:
TITO was launched using:
RESULT:

Template: 5H5Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 696 -414 -0.59 -2.90
target 2D structure prediction score : 0.67
Monomeric hydrophicity matching model chain A : 0.79

3D Compatibility (PKB) : -0.59
2D Compatibility (Sec. Struct. Predict.) : 0.67
1D Compatibility (Hydrophobicity) : 0.79
QMean score : 0.616

(partial model without unconserved sides chains):
PDB file : Tito_5H5Q.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5H5Q-query.scw
PDB file : Tito_Scwrl_5H5Q.pdb: