Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDILENPLELCGFAFIEFVSKENELDPIFETIGFSKVAKHKSKKAYLWRQGNINIILNYQPESY---ASFFFNEHGPSACAMGFKTRDAAKAFKKAVELGAEPMYS--KVGPMELNIPAIKGIGGMPIFLVDCDIYEND----FVFFDDAQRNPEG-AGLKEIDHLTHNVYKGRMEYWANFYEKIFNFQEIRYFDIKGEYTGLTSKALTAPDGMIRIPLNE-DSDKGNGQIAEFLADFNGEGIQHIAFICDDLISTWDKLKGLGLKFMTPPPNTYYEMLEERLPEHGEPTEELKQRCILLDGSTKDGQKKLLLQIFSENM--IGPVFFEFIQRKDDDGFGEGNFKALFESIERDQIRRGVLEAK
2R5V Chain:A ((13-343))---VEN-LEVAAFSWVDKYA--------FAVAGTSRSADHRS---IALRQGQVTLVLT-EPTSDRHPAAAYLQTHGDGVADIAMATSDVAAAYEAAVRAGAEAVRAPGQHS-AAVTTATIGGFGDVVHTLIQRDGTSAELPPGFTGSMDVTNHGKGDVDLLGIDHFAICLNAGDLGPTVEYYERALGFRQIFDEHIVVGAQAMNSTVVQSASGAVTLTLIEPDRNADPGQIDEFLKDHQGAGVQHIAFNSNDAVRAVKALSERGVEFL-KTPGAYYDLLGERITLQTHSLDDLRATNVLAD-EDHGGQ---LFQIFTASTHPRHTIFFEVIERQGAGTFGSSNIKALYEAVE------------


General information:
TITO was launched using:
RESULT:

Template: 2R5V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1659 -17514 -10.56 -55.25
target 2D structure prediction score : 0.55
Monomeric hydrophicity matching model chain A : 0.77

3D Compatibility (PKB) : -10.56
2D Compatibility (Sec. Struct. Predict.) : 0.55
1D Compatibility (Hydrophobicity) : 0.77
QMean score : 0.333

(partial model without unconserved sides chains):
PDB file : Tito_2R5V.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2R5V-query.scw
PDB file : Tito_Scwrl_2R5V.pdb: