Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNALTQELVELL-TLEKLEENIYRGISRNLVG--KRVFGGQVLGQALRAASYT-TDRPAHSLHAYFLYGGDINAPIIYEVDRLRDGKSFVSRQVRAIQHGRVIFSAMVSFA-NPEEGLNYQHPEPDYPAPEALKSESELKEGILNFVPENVRASFMRERHVEIRPIDPVNPFQPQPEAPFNAHYIRTHDRIPKQLEDISLHQAIVAFYSDFTLMTTALRPHGLSYISPSLQCASIDHAIYFHRPLRADEWMLYDMEATVSAASRGLNFGRMW-QNGQLVCSTVQEGLMRLREIETQ
4R9Z Chain:A ((4-267))------SLGDVLATLELERVGQWRFVGQQLPAPANHILGGHISAQALLAASRTAAGREPHSVHTYFLRPGDSRQPVDFEVVDLQEGRTFSARRVTARQDDKILMEAMSSFKV----QVVYQPIMPEAPSPESL----------------------ASLRWFERRTIE--TETVPPARVPM---WWRPDGRVP---DDPVLTASLVAYMSAVTLTEPAFAARGGVGAS-----AQRDHSVWFHGRAVLSDWLFYDRSSPSSAGSLALASGTMFNRTGELVCTVKQE-----------


General information:
TITO was launched using:
RESULT:

Template: 4R9Z.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1290 -7194 -5.58 -30.74
target 2D structure prediction score : 0.48
Monomeric hydrophicity matching model chain A : 0.75

3D Compatibility (PKB) : -5.58
2D Compatibility (Sec. Struct. Predict.) : 0.48
1D Compatibility (Hydrophobicity) : 0.75
QMean score : 0.321

(partial model without unconserved sides chains):
PDB file : Tito_4R9Z.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4R9Z-query.scw
PDB file : Tito_Scwrl_4R9Z.pdb: