Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMMTEQKSALSLRYFLNLEESQDGFGLVTFGKKQFTRFLTPVISIAIIIWGLYLGFSGVGRYYVALGVFFLVMQGLMRYWLLPMMFKRQFVRYQFGKSEQGIDLY--QDYFEFYAAGRKQAVQYSEVQTFAKGKL----------------TYMLELKNKTVIIVPKRAFAQASDQTIFENTFKK
4CHM Chain:A ((38-121))--------------------------------------------------------------------------------------------------CILHYNEADSSLSISCEDKVRVIPLSDIKALLHTRDQLQRVETKANLVDDESCVALHLLE-SGNCIPLR-FDGVKDKTCFVDLLKK


General information:
TITO was launched using:
RESULT:

Template: 4CHM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 216 617 2.86 9.35
target 2D structure prediction score : 0.36
Monomeric hydrophicity matching model chain A : 0.53

3D Compatibility (PKB) : 2.86
2D Compatibility (Sec. Struct. Predict.) : 0.36
1D Compatibility (Hydrophobicity) : 0.53
QMean score : 0.319

(partial model without unconserved sides chains):
PDB file : Tito_4CHM.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4CHM-query.scw
PDB file : Tito_Scwrl_4CHM.pdb: