Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTSSYRQQLQAKIDRITTQFSEFTPPTLEVFESPEQHFRMRAEFRIWHTENDMFYAMFERNDDGKQKTVVRIDEFPIADKSINDLMPLLLAELKANSLLSQRLFEVDFLATLSGEMLVTLIYHRKLNQEWEQAAKALAEKLNIKIMGRSRGQKIVIGDDFVVEEFELLNRSFKYKQIESSFTQPNAQVCKKMLQWACDAAEGSKKHLLELYCGNGNFTLPLSLKFERVLATELAKSSVYAAQWNIEQNQIDNIQVARLSAEEFTQAYQGEREFRRLQEADIDIQSYDFGTVFVDPPRAGIDDETLKLL--QGFERIIYISCNPDTLYENLKTLTQTHRVTKFALFDQFPYTHHVESGVLLEKI
2JJQ Chain:A ((268-419))----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NSFFQTNSYQAVNLVRKVSELVEGEK--ILDMYSGVGTFGIYLAKRGFNVKGFDSNEFAIEMARRNVEINNVDA-------------------EFEVASDREVSVKGFD--TVIVDPPRAGLHPRLVKRLNREKPGVIVYVSCNPETFARDVKML--DYRIDEIVALDMFPHTPHVE--------


General information:
TITO was launched using:
RESULT:

Template: 2JJQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 737 -57005 -77.35 -380.03
target 2D structure prediction score : 0.56
Monomeric hydrophicity matching model chain A : 0.63

3D Compatibility (PKB) : -77.35
2D Compatibility (Sec. Struct. Predict.) : 0.56
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.520

(partial model without unconserved sides chains):
PDB file : Tito_2JJQ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2JJQ-query.scw
PDB file : Tito_Scwrl_2JJQ.pdb: