Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSSRSYYSGSGTTAVVPHTISISTAETTPSQAPSSHTEQPSSDQQHESSLHQATASLPMSLNSTMNNKGASAAAAAAAAAPSSHGGDSHSIGAAAKASGSERANWNNPSFAAALRNSSGSINVDGYPPAQAHQQPSHPSLLSHSTDVDDEGDGAQHAAVNEPLEYCGVRLLPGVEQIDFDEGYYVGTIDENGEMAGYGKATWHSGDTYEGEWLNGMMHGKGTYTWADGDYYQGNYVRGRMEGRGEMKDATGLYTGEWADDMRQGYGRMLYAGGNVYEGEWLAGMRHGSGKLVEPAAHVTYEGEFNRNEKEGRGVQTNSDGDVYEGEFARGKPNGRGTYLWADGARYIGMFKDGVKHGDGCEWLANGDWVAGLFVDGEHVDSQSTRHKATVLTPDSSDADGGSEDGAGDGGAGGSRGSIGLSESTAAAVLAPLDAEKLRRIADQVHAPSFSMNVSAAAMRSLRSSLRKNSSSHYQDFSGPGGVTIEEASSPFLRSLAAPQMLLDDSDLEGWTPLKTIGKGSFGAVYTALLRNGRTVCCKV-IELGTVESEEEMEKLRNEIALMRRLRHPNCVQYYGSLEDKVQNTLNIFMEYVSGGTLTSFVAKFKSIPL----ETLRQWVYQMVCGVKYLHECGIVHRDIKGDNVLVSV-DGIVKLADFGCSKAIDDVCSATHGCSTMVGTPYWMAPEVIKCEAGGYGVKSDIWSIGCTIVEMLTGKPPWPECNSMWAAVYKIANSTGLPTEIPADIDPELMDLLQRCFERNPKLRPTAADMLSHPFLAKVTEGVASPLEKSGRK
5V24 Chain:A ((16-269))----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VLGKGTYGIVYA-----GRDLSNQVRIAIKEIPERDS--PLHEEIALHKHLKHKNIVQYLGSFSE--NGFIKIFMEQVPGGSLSALL-RSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRL------------FTGTLQYMAPEIID-----YGKAADIWSLGCTIIEMATGKPPFYE--EPQAAMFKVGMFKVHP-EIPESMSAEAKAFILKCFEPDPDKRACANDLLVDEFL-----------------


General information:
TITO was launched using:
RESULT:

Template: 5V24.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1168 -13995 -11.98 -61.38
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain A : 0.63

3D Compatibility (PKB) : -11.98
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.499

(partial model without unconserved sides chains):
PDB file : Tito_5V24.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5V24-query.scw
PDB file : Tito_Scwrl_5V24.pdb: