Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTGRFTRPQWSLATGRHYASSGHSAASSCSTHTLKVNQTESYRPGPDDSGTYSANLRDSPSRTMSNTSVSVSPMDSSSPQEWGRSFRLFNSCRFLTSASGSRQRDGSIGQLYRSTFLHGRQGRGSSVGPEAERPLLGSSMIHQPQSSFFGAFSGQGGRYSFWPPDVNASGVLTAASPYAASNPSAPLSTASPLLGSSRFLGTGISPRGLADGHAVHRVVASCAMGSVVCTVSPGQNELPLAMNALRTHLALRGKTIIQGDAAHPLEI-RKGPLIGAGGFAKVFAGVDTVRGELVAIKEIDISGVDDVKALNAIEAEFALLKSLHHPNIVSYSLFEHSKSQKVCRIAMELLAGDSTLHLLQKFGPLTEAVLRIVARSVLRAIRFIHKEGIFHRDIKPANILVSHRGEVKLCDFGCSKRVSELNKAASCIIGTPVYMAPEFIKGEA-NHKADIWSMACALFELSTGLLPWYHSGVKDNLPLMFYITTTSESPMVLPSPEAKSEFSAEFLSFMELCFTRNVANRPEADDLLKHPWITGSRLAPVPNLPSAVLSLHQESSAVFRAFGSPGKSSTFSSPRDSAADRDDMSFNGSDGLQKSVSTTPTLNPAEEEMACQQELETVAAATALELCSLLVCSLEIPPRTAQETVTGEVGSGTGDTSPSLTRTFSIHSPALSHRGGGVSASVAEFLSPVYTPEHSMVHENFYYSQVPLGASAGNFVLPPGLDLDGAPPQQQYLRINEEGNLDMVYLPGDEMEDSVHGRSTFGDSVYGSFHAGRIVSPARNSSFSRGTLSPRVAAGPNTVGVADGPFSPLLGISGVFSRRESPSRGGPSVPSSPQGIPAPPLLYRPGPSTTFVSQPSSHTGSMHTSHVSPTSTSKAGSNVDAATPHTPRSNSPTSTQRSESFRGLPEKLKTHADGKLHMSFSVNTAPGCAVNVELNVDVADVQCKVVDNQPNFVVAFTDDVRSQIANKIKEVAEHSSSGKPAQTAGTHASSLSPLCGMEARRSVSAGGGHFYNSPLFAAASKATPRPLSRVSTGSAQRLVAVPREALAGYSSYSGEEGSDVDSHTSSPVTAGWNERVGK
4W8D Chain:A ((5-266))----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MQNLKADPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLE--EAEDEIEDIQQEITVLSQCDSPYVTKY-YGSYLKDTKLW-IIMEYLGGGSALDLLEP-GPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPP--HSELH---PMKVLFLIPKNNP-----PTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFI-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4W8D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1354 -18504 -13.67 -71.17
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain A : 0.58

3D Compatibility (PKB) : -13.67
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.58
QMean score : 0.521

(partial model without unconserved sides chains):
PDB file : Tito_4W8D.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4W8D-query.scw
PDB file : Tito_Scwrl_4W8D.pdb: