Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceWYHGNLTRHAAEALLLSNGCDGSYLLRDSNETTGLYSLSVRAKDSVKHFHVEYTGYSFKFGFNEFSSLKDFVKHF
2PLD Chain:A ((11-84))WYHASLTRAQAEHMLMRVPRDGAFLVRKRNEPNS-YAISFRAEGKIKHCRVQQEGQTVMLGNSEFDSLVDLISYY


General information:
TITO was launched using:
RESULT:

Template: 2PLD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 241 -32925 -136.62 -444.93
target 2D structure prediction score : 0.73
Monomeric hydrophicity matching model chain A : 0.79

3D Compatibility (PKB) : -136.62
2D Compatibility (Sec. Struct. Predict.) : 0.73
1D Compatibility (Hydrophobicity) : 0.79
QMean score : 0.508

(partial model without unconserved sides chains):
PDB file : Tito_2PLD.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2PLD-query.scw
PDB file : Tito_Scwrl_2PLD.pdb: