Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMWYNLFMAYSIDFRKKVLSYCERTGSITEASHVFQISRNTIYGWLKLKEKTGELNHQVKGTKPRKV---DRDRLKNYLTDNPDAYLTEIASEFGCHPTTIHYALKAMGYTRKKEPHLL
1HLV Chain:A ((2-47))-----------------------------------------------------------GPKRRQLTFREKSRIIQEVEENPDLRKGEIARRFNIPPSTLSTILK-------------


General information:
TITO was launched using:
RESULT:

Template: 1HLV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 80 -769 -9.61 -17.87
target 2D structure prediction score : 0.79
Monomeric hydrophicity matching model chain A : 0.60

3D Compatibility (PKB) : -9.61
2D Compatibility (Sec. Struct. Predict.) : 0.79
1D Compatibility (Hydrophobicity) : 0.60
QMean score : 0.765

(partial model without unconserved sides chains):
PDB file : Tito_1HLV.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1HLV-query.scw
PDB file : Tito_Scwrl_1HLV.pdb: