Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMWYNRAMKHFDTIVIGGGPAGMMATISSSFYGQKTLLIEKNRKLGKKLAGTGGGRCNVTN-NGSLDNLLAGIPGNGRFLYSVFSQFDNHDIINFFTENGVKLKVEDHGRVFPASDKSRTIIEALEKKITELGGQVATQIEIVSVKKVDDQFVLKSADQTFTCEKLIVTTGGKSYPSTGSTGFGHEIARHFKHTITDLEAAESPLLTDFPH----KALQGISLDDVTLSYGKHVITHDLLFTHFGLSGPAALRMSSFVKGGEVLSLDVLPQLSEKDLVTFLE----ENREKSLKNALKTLLPERLAEFFVQGYP---EKVKQLTEKEREQLVQSIKELKIPVTGKMSLAKSFVTKGGVSLKEINPKTLESKLVPGLHFAGEVMDINAHTGGFNITSALCTGWVAGSLHYD
3V76 Chain:A ((50-414))-------------------------------GRRVLVIDHARAPGEKIRISGGGRCNFTNIHASPRNFLSGNP---HFCKSALARYRPQDFVALVERHGIGWHEKTLGQLF-CDHSAKDIIRMLMAEMKEAGVQLRLETSIGEVERTASGFRVTTSAGTVDAASLVVASGGKSIPKMGATGLAYRIAEQFGLPVVETRPALVPLTLDQAQLAKLGALAGVAAD-AEARFGKAAFREAVLITHRGLSGPAILQISSYWREGEEIVLRLMPDI---DIASILKGMRRANGRQAVQTALADILPRRLAQFFADEAKLTGRMLADLSDKTIDALASSIQVWAVKPAGSEGYRTAEVTLGGVDTRALDSRTMQAKEVPGLYFVGECVDVTGWLGGYNFQWAWASGFVAG-----


General information:
TITO was launched using:
RESULT:

Template: 3V76.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1782 16801 9.43 47.59
target 2D structure prediction score : 0.52
Monomeric hydrophicity matching model chain A : 0.76

3D Compatibility (PKB) : 9.43
2D Compatibility (Sec. Struct. Predict.) : 0.52
1D Compatibility (Hydrophobicity) : 0.76
QMean score : 0.453

(partial model without unconserved sides chains):
PDB file : Tito_3V76.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3V76-query.scw
PDB file : Tito_Scwrl_3V76.pdb: