Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRKGGLDMLNLTHVTLKTRQVILQDADFTFKKGRIYGLLAINGSGKTTLFRAMSKLLPLSSGHIAV-------PPSLF-----YYESVEWLDGNLSGMDYLRLIKNIW-----KSDLNLRDEIAYWEMADYISLPIRKYSLGMKQRLVIAMYFLSQAKCWLMDEITNGLDEYYRQKFFDRLA
4RVC Chain:A ((14-177))-----------------TAQNVLEDVTFVVDRGEMVALIGLNGAGKSTTIKHIIGLMEPRRGAISINGYRLADGPETYRRQFAYIPETPVLYEELTLEEHLRLAAMAYGLSEAEYERRLPPLLREFRLERRLSSFPAHFSKGMKQKVMIVCAFLLEPPLYIIDEPFLGLDPLAIHALLERM-


General information:
TITO was launched using:
RESULT:

Template: 4RVC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 499 -33228 -66.59 -226.04
target 2D structure prediction score : 0.52
Monomeric hydrophicity matching model chain A : 0.72

3D Compatibility (PKB) : -66.59
2D Compatibility (Sec. Struct. Predict.) : 0.52
1D Compatibility (Hydrophobicity) : 0.72
QMean score : 0.371

(partial model without unconserved sides chains):
PDB file : Tito_4RVC.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4RVC-query.scw
PDB file : Tito_Scwrl_4RVC.pdb: