Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTAIVELKNATKIVKNGFDEEKIILNDVSLEIFEQDFITILGGNGAGKSTLFNTIAGTISLTSGTIRILGEDVT--KFSPEKRAKYLSRVFQDPKMGTAPRMTVAENLLIAKFRGEKRGLFPRRLASYKDKFQATIEKVGNGLEKHLNTPIEFLSGGQRQALSLLMATLKRPELLLLDEHTAALDPKTSVALMELTDEFVKKDQLTALMITHHMEDALKYGNRLIVMKEGRVIQDLKQEEKAKMKISDYYQLFE
4MKI Chain:B ((7-226))----IKVENVSFIYNEGTPYATVALKDINFSIDDEEFVGIIGHTGSGKSTLIQQLNGLLKPSKGKIYINGIDITDKKVSLKDIRKQVGLVFQYPEYQLFEE-TVFKDI---AFGPSNLGLSEEEV---KERVYEAMEIVGISKELADKSPFE-LSGGQKRRVAIAGILAMRPKILILDEPTAGLDPKGKQEILNKIKEIHDKYKMITILVSHNMEDIARIADKIIVMNRGKI----------------------


General information:
TITO was launched using:
RESULT:

Template: 4MKI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1052 -26159 -24.87 -119.99
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain B : 0.75

3D Compatibility (PKB) : -24.87
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.75
QMean score : 0.510

(partial model without unconserved sides chains):
PDB file : Tito_4MKI.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4MKI-query.scw
PDB file : Tito_Scwrl_4MKI.pdb: