Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMMKRTWRNSFVTNLNTPFMIGNIEIPNRTVLAPMAGVTNSAFRTIAKELGAGL-VVMEMVSDKGIQYNNEKTLHMLHIDEGENPVSIQLFGSDEDSLARAAEFIQENTKTDIVDINMGCPVNKIVKNEAGAMWLKDPDKIYSIINKVQSVLDIPLTVKMRTGWADPSLAVENALAAEA---AGVSALAMHGRTREQMYTGHADLET-------LYKVAQALTKIPFIANGDIRTVQEAKQRIEEVGADAVMIGRAAMGNPYLFNQINHYFETGEILPDLTFEDKMKIAYEHLKRLINLKGENVAVREFRGLAPHYLRGTSGAAKLRGAISQASTLAEIEALLQLEKA
3B0U Chain:X ((5-240))---------------------------RLSVAPMVDRTDRHFRFLVRQVSLGVRLYTEMTVDQAVLRGNRERL--LAFRPEEHPIALQLAGSDPKSLAEAAR-IGEAFGYDEINLNLGCPSEKAQEGGYGACLLLDLARVREILKAMGEAVRVPVTVKMRLGLEGKETYRGLAQSVEAMAEAGVKVFVVHARSALLALSTKANREIPPLRHDWVHRLKGDFPQLTFVTNGGIRSLEEALFHLKRV--DGVMLGRAVYEDPFVLEEADR-------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3B0U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain X - contact count / total energy / energy per contact / energy per residue : 1250 -4949 -3.96 -22.00
target 2D structure prediction score : 0.73
Monomeric hydrophicity matching model chain X : 0.69

3D Compatibility (PKB) : -3.96
2D Compatibility (Sec. Struct. Predict.) : 0.73
1D Compatibility (Hydrophobicity) : 0.69
QMean score : 0.426

(partial model without unconserved sides chains):
PDB file : Tito_3B0U.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3B0U-query.scw
PDB file : Tito_Scwrl_3B0U.pdb: