Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMIGQQRNILATLGIDVWIPRTQVCQKNNAHTLWRDQVVEPHESITVPTIDVPAFEQKNTQPQVFEIPKVVEEPPIVVAEVSQPEILVEKPKVIEQETITPFELQAYCLEKCVIFVDVTALETEEKQLWANIQKAKVGRYSELRWPFPLAAYQDQRGVGSYIQGFLDAVAAEKKILCLGKCAY-IQHANIIHLASLKEMLDKPLLKKRLWQLMQDNNE
1EM8 Chain:D ((40-128))----------------------------------------------------------------------------------------------------------------VMVANDLPAL-TDPLVSDVLRALTVSPDQVLQ----LTPEK---I-----AMLPQ-GSHCNSWRLGTDEPLSLEGAQVASPALTDLRANPTARAALWQQICTY--


General information:
TITO was launched using:
RESULT:

Template: 1EM8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 335 -40662 -121.38 -462.06
target 2D structure prediction score : 0.57
Monomeric hydrophicity matching model chain D : 0.58

3D Compatibility (PKB) : -121.38
2D Compatibility (Sec. Struct. Predict.) : 0.57
1D Compatibility (Hydrophobicity) : 0.58
QMean score : 0.419

(partial model without unconserved sides chains):
PDB file : Tito_1EM8.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1EM8-query.scw
PDB file : Tito_Scwrl_1EM8.pdb: