Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSLLLKVRQNVPQVQSIKTSLKKRAGQKIPHMLSNASDLFFRGSEIALSGKTPFDVIYKHEIISLRHYRIETEASAHKHRVPLVIVPPLAVNMLIYDLFPTRSLIRYFLDQGFEVYLIDW---GVPTRNQAKYNFGTYVKVFMPEMLKQVRIHSGQQQLSLHGWSLGGALSLCYTALFKDKDIKNLMI--LASPIDTHKAGYMGKLYGSLTKPAQWVRKHTPFRIRQHVPSEVFHIHGWQNTLGFKLTAPIGNLKTYWQLLKNLDNREFIVDHATSSSFIDNMLAYPGGVMRDIILRFWIDNELSTGVIKFGELTAYLKDIDCSVLAVGGDTDIIVTADAVKPLMDLISSQDKTFKTVPSGHMGVVSGSQAPTSVWPEMSNWLAMRSD
5H3H Chain:A ((44-133))-----------------------------------------------------------------------------------------------------------LLEEGYRYIGVDYRGYGKSDAPATGYDYTTMASD-INEVIQQLKL----TNVTLLGFSMGGGIALKYLLNHGESNVSKLILAGAAAPVFTQRDGY------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5H3H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 287 -29819 -103.90 -350.81
target 2D structure prediction score : 0.67
Monomeric hydrophicity matching model chain A : 0.55

3D Compatibility (PKB) : -103.90
2D Compatibility (Sec. Struct. Predict.) : 0.67
1D Compatibility (Hydrophobicity) : 0.55
QMean score : 0.515

(partial model without unconserved sides chains):
PDB file : Tito_5H3H.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5H3H-query.scw
PDB file : Tito_Scwrl_5H3H.pdb: