Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNTLAERLRYAMEVLPPKKIKGVELARAVGVKPPSVSDWLSGKSKTMEGENLLRASKFLNVNPSWLASGTGEIQTSTKDKFKQLDIEEFKKKYNISDSDEALLFSTIIEKPFIPSSKRWVPVKAYSKMGMDGYFTDIGYEGNAGDGYVPTHTAGSRAYAVKGTGDSMFPAIRNGWYVVCDPDADLVPNEFVQVCLKDGRCTIKEFVGINGGVLSLLSVNGGERFFFEMDEVESITAITDIVPPSQHRQEHPYSH
3JXD Chain:L ((5-66))---MGERIRARRKKL---KIRQAALGKMVGVSNVAISQWERSETEP-NGENLLALSKALQCSPDYLLKG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3JXD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain L - contact count / total energy / energy per contact / energy per residue : 238 -28714 -120.65 -463.13
target 2D structure prediction score : 0.68
Monomeric hydrophicity matching model chain L : 0.58

3D Compatibility (PKB) : -120.65
2D Compatibility (Sec. Struct. Predict.) : 0.68
1D Compatibility (Hydrophobicity) : 0.58
QMean score : 0.627

(partial model without unconserved sides chains):
PDB file : Tito_3JXD.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3JXD-query.scw
PDB file : Tito_Scwrl_3JXD.pdb: