Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNKTNIILAVLIGLIVGGVIGAFGYAKTAAKYDAISTACVMMNEAVENNLLTVEQVKTLGELTGTNMKKDYPTVASKFAFSPENLKNASEASNCSQFIVGFNQSK
4P1A Chain:A ((15-42))----KILIGLILGAIVGLILGHYGYAHAVHTY-------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4P1A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 26 -4179 -160.73 -149.25
target 2D structure prediction score : 0.86
Monomeric hydrophicity matching model chain A : 0.63

3D Compatibility (PKB) : -160.73
2D Compatibility (Sec. Struct. Predict.) : 0.86
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.467

(partial model without unconserved sides chains):
PDB file : Tito_4P1A.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4P1A-query.scw
PDB file : Tito_Scwrl_4P1A.pdb: