Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLIHYPVYFFFELIQASCNEYIASGSNKEDIMLLNRKHSLVSCFDLELLETHPVKIKNSKVKQKNFITVSLEFSFKKIPPIF
3CJL Chain:B ((59-76))----------------------------GEVMMQQRKHPLFKEFSA------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3CJL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 19 -1747 -91.95 -97.06
target 2D structure prediction score : 0.28
Monomeric hydrophicity matching model chain B : 0.53

3D Compatibility (PKB) : -91.95
2D Compatibility (Sec. Struct. Predict.) : 0.28
1D Compatibility (Hydrophobicity) : 0.53
QMean score : 0.424

(partial model without unconserved sides chains):
PDB file : Tito_3CJL.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3CJL-query.scw
PDB file : Tito_Scwrl_3CJL.pdb: