Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAGCGCASTCSPTKKASPRFRKALWIALVINALMFVVEIVGGYQAQSVSLWADALDFAGDAANYALSLVVLSMSL----YWRATAALVKGITMAAFGFFVIAKVVWSFFHGVSPEPMVMGAIGVIALIANVSVALMLYAFRDGDANMRSVWLCSRNDSIANIAVVLAAVGVFGTGTIFPDLFVAFVIAYLGVSSGYAVIKQSLQERKQSKLMLGSEA
3H90 Chain:B ((112-202))---------------------IVTIVALICTIILVSFQRWVVRRTQSQAVRADMLHYQSDVMMNGAILLALGLSWYGWHRADALFALGIGIYILYSALRMGYEAVQSLLDRA---------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3H90.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 160 -20726 -129.53 -238.22
target 2D structure prediction score : 0.69
Monomeric hydrophicity matching model chain B : 0.53

3D Compatibility (PKB) : -129.53
2D Compatibility (Sec. Struct. Predict.) : 0.69
1D Compatibility (Hydrophobicity) : 0.53
QMean score : 0.096

(partial model without unconserved sides chains):
PDB file : Tito_3H90.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3H90-query.scw
PDB file : Tito_Scwrl_3H90.pdb: