Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLNSEFQPNWLYPPSEVIKNFIQLNNIDTSAFDVSTKKIIDDLVNQNTKIDLYTSEVLKEAIGGTTQFWLNIQNQFTINSLRIQNSSVDNNFSEYRNLVNELKKLHWTPESKYDYLDQINLKSFFGISEFSLLTKKYIVQHNLRVKFKNIGQYNSSELNVATLIRKAELEAKKQPILSPWNKLLFIEKLQEIKKLSKVKGFKNFRNELLSICNQCGVAFIVLDTLNKSPIRGISKFLDSNIGLIIVTTKYNKDDVFWQTFFHEAGHLVLHSKEMVFSDQGDLNKEASHNLEEAQADEFMLTHILHPYTIEEVTNMFNTRIMYKSKTESWRNICQIARQVNISPSLLTGILKFQGIIPYSYFTNGHEKLYD
3DVW Chain:A ((110-143))--------------------------------DVANSHIFDAMVNQ--KIKLQNPEVLKKWLGEQTAF--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3DVW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 61 -9287 -152.24 -273.13
target 2D structure prediction score : 0.68
Monomeric hydrophicity matching model chain A : 0.54

3D Compatibility (PKB) : -152.24
2D Compatibility (Sec. Struct. Predict.) : 0.68
1D Compatibility (Hydrophobicity) : 0.54
QMean score : 0.539

(partial model without unconserved sides chains):
PDB file : Tito_3DVW.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3DVW-query.scw
PDB file : Tito_Scwrl_3DVW.pdb: