Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMQSGGFLVMCPFCGRSKGGLVCGYCGWVSKDKKFRFVVVKNG
1KK3 Chain:A ((60-81))---------CPNCGRYSTSPVCPYCG----------------


General information:
TITO was launched using:
RESULT:

Template: 1KK3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 29 -4504 -155.29 -264.91
target 2D structure prediction score : 0.71
Monomeric hydrophicity matching model chain A : 0.60

3D Compatibility (PKB) : -155.29
2D Compatibility (Sec. Struct. Predict.) : 0.71
1D Compatibility (Hydrophobicity) : 0.60
QMean score : 1.335

(partial model without unconserved sides chains):
PDB file : Tito_1KK3.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1KK3-query.scw
PDB file : Tito_Scwrl_1KK3.pdb: