Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMFVALSFDWVFFFGVNMDTIEAKKNLNALCNEIEKLQNLSRSLMTAKEMLDIDAKIKRHKEQVKNIRSNLHA
3IP4 Chain:C ((6-43))-----------------------------REEVEHIANLARLQISPEETEEMANTLESILDFAKQND-----


General information:
TITO was launched using:
RESULT:

Template: 3IP4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 48 -5597 -116.60 -147.29
target 2D structure prediction score : 0.71
Monomeric hydrophicity matching model chain C : 0.58

3D Compatibility (PKB) : -116.60
2D Compatibility (Sec. Struct. Predict.) : 0.71
1D Compatibility (Hydrophobicity) : 0.58
QMean score : 0.644

(partial model without unconserved sides chains):
PDB file : Tito_3IP4.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3IP4-query.scw
PDB file : Tito_Scwrl_3IP4.pdb: