Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMCGIVGGVAERCVTEILIEGLKRLEYRGYDSAGVALLNNQQILRERRVGKVANLADAVSEHQLTGAIGIAHTRWATHGKPTENNAHPHMSGKVAVVHNGIIENYQELKDDLQALGYVFTSQTDTEVVAHLVAEALKNTDSLLEAVESVVPQLKGAYALGIIHSDYPDELITVREGSPLVIGVGIGENFISSDQLALLPVTNRFIYLEEGDIARLTRTSIEVFVKGERVERPVKELDATVSSASKGEYKHYMLKEIYEQPEAIKQTISQALD-GNNLRDDFLKDADADFSKLQSVQIIACGTSYHSGMIAKYWFEQLIGVPCQVEIASEFRYRSPVIVENTLYICISQSGETADTLAALRETQKRAKANNIDIQTLTICNVATSSMVRETDHHLLTLAGPEIGVASTKAFTTQLAALMLLILKIGQVKQRISNVMIEELARELWHSPKVILDTLKNDPEILRLSELFVEKQHCLFLGRGTHYPIALEGALKLKEISYIHAEGYAAGELKHGPLALVDNEMPIVILAPNDEMLDKLKSNMEEVQARGGELFVFADENSGVVEKDRQHVVHTPAVNEWLAPIIYSVPVQLLSYHVAVLRGTDVDQPRNLAKSVTVE
2VF5 Chain:X ((243-608))-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GDKGIYRHYMQKEIYEQPNAIKNTLTGRISHGQVDLSELGPNADELLSKVEHIQILACGTSYNSGMVSRYWFESLAGIPCDVEIASEFRYRKSAVRRNSLMITLSQSGETADTLAGLRLSKELGY-----LGSLAICNVPGSSLVRESDLALMTNAGTEIGVASTKAFTTQLTVLLMLVAKLSRLKGLDASIE-HDIVHGLQALPSRIEQMLSQDKRIEALAEDFSDKHHALFLGRGDQYPIALEGALKLKEISYIHAEAYAAGELKHGPLALIDADMPVIVVAPNNELLEKLKSNIEEVRARGGQLYVFADQDAGFVSSDNMHIIEMPHVEEVIAPIFYTVPLQLLAYHVALIKGTDVDQPRNLAKSVTVE


General information:
TITO was launched using:
RESULT:

Template: 2VF5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain X - contact count / total energy / energy per contact / energy per residue : 2174 -85710 -39.43 -234.82
target 2D structure prediction score : 0.65
Monomeric hydrophicity matching model chain X : 0.74

3D Compatibility (PKB) : -39.43
2D Compatibility (Sec. Struct. Predict.) : 0.65
1D Compatibility (Hydrophobicity) : 0.74
QMean score : 0.516

(partial model without unconserved sides chains):
PDB file : Tito_2VF5.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2VF5-query.scw
PDB file : Tito_Scwrl_2VF5.pdb: