Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAEFSIIDQYFNRQSHPDVALGIGDDSALITPPPNQQLVICADTLVAGRHFPLETLSHAIGWKSVAVNLSDIAAMGAKPHSILLAISLPQVDHEWLEGFSQGIYDCCNQFGVALIGGDTTQGPHLTITVTAMGWIETGKAVLRSGAKVGDYVCVSGQIGDAAYG--------------LQHLGHSLQQRLDYPTPRCKLGEELKGLASSMIDVSDGLAQDLGHILKASKVGARLILEKLPVDPVLQQLEEQQRWQYA-LAGGDDYELCFTITPQNYEKL--LQKQLDVKITMIGQIVEQTKLTFEHLGSDYPLQIHGYQHFA
3MCQ Chain:A ((8-309))-----LIQRYF-RRAHPSAVLGVGDDAALIQPSPGMELAVSADMLVANTHFYPNIDPWLIGWKSLAVNISDMAAMGAQPRWATLTIALPEADEDWISKFAAGFFACAAQFDIALIGGDTTRGP-LTISVQIMGETPPGASLLRSTARADDDIWVSGPLGDAALALAAIQGRYPLSDTELAACGKALHQ----PQPRVVLGQALRGLAHSALDISDGLLADLGHILEHSQVGAEVWLKAIPKSEVVSAHSQEVAIQKMILSGGDDYELCFTASTQHRQQIADIGRQLSLDMAVIGRITDTQQLVIHGL-DDAPLT--------


General information:
TITO was launched using:
RESULT:

Template: 3MCQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1526 -107818 -70.65 -378.31
target 2D structure prediction score : 0.53
Monomeric hydrophicity matching model chain A : 0.81

3D Compatibility (PKB) : -70.65
2D Compatibility (Sec. Struct. Predict.) : 0.53
1D Compatibility (Hydrophobicity) : 0.81
QMean score : 0.486

(partial model without unconserved sides chains):
PDB file : Tito_3MCQ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3MCQ-query.scw
PDB file : Tito_Scwrl_3MCQ.pdb: