Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLQPKRTKFRKVHKGRNTGLAHRGSTVSFGSIAIKATERGRMTARQIEAARRAISRRIKRGGKIFIRVFPDKPITEKPLEVRMGNGKGNVEYWVCEIKPGKILYEIEGVNEDLAREAFALAAAKLPFKTTIVTRTVM
4CSU Chain:M ((1-136))MLQPKRTKFRKMHKGRNRGLAQ-GTDVSFGSFGLKAVGRGRLTARQIEAARRAMTRAVKRQGKIWIRVFPDKPITEKPLAVRMGKGKGNVEYWVALIQPGKVLYEMDGVPEELAREAFKLAAAKLPIKTTFVTKTVM


General information:
TITO was launched using:
RESULT:

Template: 4CSU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain M - contact count / total energy / energy per contact / energy per residue : 572 -34912 -61.03 -256.70
target 2D structure prediction score : 0.68
Monomeric hydrophicity matching model chain M : 0.96

3D Compatibility (PKB) : -61.03
2D Compatibility (Sec. Struct. Predict.) : 0.68
1D Compatibility (Hydrophobicity) : 0.96
QMean score : 0.668

(partial model without unconserved sides chains):
PDB file : Tito_4CSU.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4CSU-query.scw
PDB file : Tito_Scwrl_4CSU.pdb: